Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
herpud2HERPUD family member 2. (420 aa)    
Predicted Functional Partners:
syvn1
Synoviolin 1.
   
 
 0.704
AMFR
Autocrine motility factor receptor.
   
 
 0.696
LOC115056582
E3 ubiquitin-protein ligase AMFR-like.
   
 
 0.636
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.621
LOC115043665
Cyclic AMP-dependent transcription factor ATF-4-like.
   
 
 0.558
edem1
ER degradation enhancing alpha-mannosidase like protein 1.
   
  
 0.536
ENSENLP00000009607
DnaJ heat shock protein family (Hsp40) member B9b.
   
  
 0.526
LOC115056802
dnaJ homolog subfamily B member 9-like.
   
  
 0.526
ENSENLP00000044395
Heat shock protein 5.
   
 
 0.505
rps27a
Ribosomal protein S27a.
    
 
 0.498
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.