Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tbx20T-box transcription factor 20. (439 aa)    
Predicted Functional Partners:
nkx2-5
NK2 homeobox 5.
   
 0.981
phf13
PHD finger protein 13.
    
   0.974
slc25a21
Solute carrier family 25 member 21.
    
   0.974
blvra
Biliverdin reductase A.
    
   0.948
gata4
GATA binding protein 4.
   
 0.927
gata6
GATA binding protein 6.
   
 0.861
gsc
Goosecoid homeobox.
    
 0.858
ENSENLP00000034511
Dharma.
    
 0.858
gata5
GATA binding protein 5.
   
 0.854
mef2c
Myocyte enhancer factor 2C.
    
 0.801
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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