Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrrc40Leucine rich repeat containing 40. (599 aa)    
Predicted Functional Partners:
cnpy3
Canopy FGF signaling regulator 3.
    
 0.984
mri1
Methylthioribose-1-phosphate isomerase 1.
    
   0.928
cnpy4
Canopy FGF signaling regulator 4.
    
 0.913
ENSENLP00000001614
Potassium channel tetramerization domain containing 3.
    
   0.826
shkbp1
SH3KBP1 binding protein 1.
    
   0.826
smim12
Small integral membrane protein 12.
   
 
 0.779
wls
Wnt ligand secretion mediator.
      
 0.697
tcaim
T cell activation inhibitor, mitochondrial.
   
  
 0.687
ENSENLP00000017293
Si:ch211-220f12.4.
      
 0.682
snapc3
Small nuclear RNA activating complex polypeptide 3.
      
 0.680
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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