STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115045658E3 ubiquitin-protein ligase Itchy-like. (894 aa)    
Predicted Functional Partners:
ENSENLP00000004347
Ubiquitin B.
    
 0.953
rps27a
Ribosomal protein S27a.
    
 0.952
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.943
cflar
CASP8 and FADD like apoptosis regulator.
    
 0.942
traf6
TNF receptor associated factor 6.
    
 0.924
LOC115043698
E3 ubiquitin-protein ligase Itchy-like.
  
  
 
0.913
ENSENLP00000046272
WW domain containing E3 ubiquitin protein ligase 1.
  
 
0.892
LOC115056053
NEDD4-like E3 ubiquitin-protein ligase WWP2.
  
 
0.878
LOC115045233
Thioredoxin-interacting protein-like.
    
 
 0.867
txnip
Thioredoxin interacting protein.
    
 
 0.867
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.