Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115048533Vascular cell adhesion protein 1-like. (365 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2 group IVA.
     
  0.611
ENSENLP00000049292
Vav 3 guanine nucleotide exchange factor b.
    
 0.554
ntng1
Netrin G1.
    
 0.554
LOC115052469
Programmed cell death 1 ligand 1-like.
   
  0.476
lrit3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
  0.468
LOC115055682
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
    
  0.468
lrit1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
  0.468
ENSENLP00000007792
annotation not available
    
  0.460
ENSENLP00000031761
Relaxin family peptide receptor 1.
    
  0.460
ENSENLP00000043272
Relaxin family peptide receptor 2a.
    
  0.460
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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