Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000001253Collagen, type V, alpha 2b. (1282 aa)    
Predicted Functional Partners:
ENSENLP00000026470
Collagen, type I, alpha 2.
   
 
  0.840
ENSENLP00000007864
annotation not available
     
 0.824
ENSENLP00000003672
Procollagen, type IX, alpha 2.
     
  0.822
ENSENLP00000025649
Collagen, type IX, alpha 3.
     
  0.822
ENSENLP00000037235
annotation not available
     
  0.822
ENSENLP00000003615
annotation not available
     
 0.759
ENSENLP00000015309
annotation not available
     
 0.759
LOC115048217
Collagen alpha-1(I) chain-like.
   
 
  0.717
ENSENLP00000038570
Collagen, type I, alpha 1b.
   
 
  0.717
ENSENLP00000054517
Collagen, type VI, alpha 1.
   
 0.714
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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