Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
uchl5Ubiquitin C-terminal hydrolase L5. (361 aa)    
Predicted Functional Partners:
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 0.997
ENSENLP00000037629
Proteasome 26S subunit, ATPase 1a.
   
 0.995
psmd6
Proteasome 26S subunit, non-ATPase 6.
   
 0.994
ENSENLP00000016947
Proteasome 26S subunit, non-ATPase 7.
   
 0.976
psmb4
Proteasome 20S subunit beta 4.
   
 0.974
psmd8
Proteasome 26S subunit, non-ATPase 8.
   
 0.973
psmb1
Proteasome 20S subunit beta 1.
   
 0.970
psmd13
Proteasome 26S subunit, non-ATPase 13.
   
 0.969
LOC115046382
Proteasomal ubiquitin receptor ADRM1-like.
    
 0.968
nfrkb
Nuclear factor related to kappaB binding protein.
    
 0.968
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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