Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000001336annotation not available (190 aa)    
Predicted Functional Partners:
pou1f1
POU class 1 homeobox 1.
    
 0.830
ENSENLP00000004818
Helicase, lymphoid specific.
    
 
 0.797
ENSENLP00000048193
annotation not available
    
   0.712
rgn
Regucalcin.
      
 0.697
ENSENLP00000010995
LIM homeobox 4.
    
 0.652
LHX3
LIM homeobox 3.
    
 0.652
ENSENLP00000027901
WD repeat domain 90.
    
   0.577
ENSENLP00000031230
Transmembrane protein 126A.
      
 0.565
LOC115060272
Serum response factor-like.
    
 0.556
SRF
Serum response factor.
    
 0.556
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.