STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eedEmbryonic ectoderm development. (921 aa)    
Predicted Functional Partners:
nol6
Nucleolar protein 6.
   
 0.999
wdr36
WD repeat domain 36.
   
0.999
utp4
UTP4 small subunit processome component.
   
 0.999
tbl3
Transducin beta like 3.
  
0.999
wdr3
WD repeat domain 3.
   
0.999
UTP18
UTP18 small subunit processome component.
   
 0.999
wdr43
WD repeat domain 43.
   
 0.998
wdr46
WD repeat domain 46.
   
 0.997
mphosph10
M-phase phosphoprotein 10.
   
 0.997
ENSENLP00000007973
UTP20 small subunit processome component.
   
 0.997
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.