STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpy19l1Dpy-19 like C-mannosyltransferase 1. (804 aa)    
Predicted Functional Partners:
ENSENLP00000015812
Coiled-coil domain containing 62.
      
 0.699
ENSENLP00000037394
5'-nucleotidase domain containing 1.
      
 0.696
tsr3
TSR3 ribosome maturation factor.
      
 0.679
tsr2
TSR2 ribosome maturation factor.
      
 0.672
ENSENLP00000035386
Coiled-coil domain containing 125.
      
 0.669
LOC115040217
Cytohesin-4-like.
      
 0.668
ENSENLP00000024417
Unc-5 netrin receptor A.
    
 
 0.656
tsr1
TSR1 ribosome maturation factor.
      
 0.649
ENSENLP00000040574
Protein interacting with prkca 1.
      
 0.635
pigb
Phosphatidylinositol glycan anchor biosynthesis class B.
      
 0.624
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.