STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000001367Serine/arginine repetitive matrix 4. (443 aa)    
Predicted Functional Partners:
LOC115049622
Malate synthase, glyoxysomal-like.
   
 0.816
rbmx2
RNA binding motif protein X-linked 2.
    
 
 0.813
mex3b
Mex-3 RNA binding family member B.
    
 0.744
LOC115047269
Next to BRCA1 gene 1 protein-like.
    
 0.740
LOC115060315
Next to BRCA1 gene 1 protein-like.
    
 0.740
ENSENLP00000032286
annotation not available
    
 
 0.702
LOC115035496
Unconventional myosin-VI-like.
    
 
 0.702
ENSENLP00000009714
Si:dkey-15b23.3.
    
 0.699
TMC2
Transmembrane channel like 2.
    
 0.699
TMC1
Transmembrane channel like 1.
    
 0.699
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.