Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115047076Retinoic acid receptor alpha-B-like. (503 aa)    
Predicted Functional Partners:
zbtb16
Zinc finger and BTB domain containing 16.
    
 0.866
LOC115060388
Mediator of RNA polymerase II transcription subunit 1-like.
    
  0.858
spi1
Spi-1 proto-oncogene.
    
 0.834
nrip1
Nuclear receptor interacting protein 1.
    
 0.811
ENSENLP00000001265
annotation not available
   
 0.800
RXRB
Retinoic acid receptor RXR-beta-A.
   
 0.800
rxra
Retinoid X receptor alpha.
   
 0.800
LOC115045520
Retinoic acid receptor RXR-beta-A-like.
   
 0.800
ENSENLP00000004092
Nuclear receptor corepressor 1.
    
 0.751
ENSENLP00000043678
Nuclear receptor corepressor 2.
    
 0.751
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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