STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
def8Differentially expressed in FDCP 8 homolog. (442 aa)    
Predicted Functional Partners:
uvrag
UV radiation resistance associated.
    
 0.918
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.660
becn1
Beclin 1.
    
 
 0.658
plekhm3
Pleckstrin homology domain containing M3.
    
 
0.528
mthfsd
Methenyltetrahydrofolate synthetase domain containing.
      
 0.526
ENSENLP00000013766
Phosphoinositide-3-kinase, regulatory subunit 4.
    
 
 0.499
pdcd5
Programmed cell death 5.
      
 0.497
ENSENLP00000026198
SAM domain, SH3 domain and nuclear localisation signals 1a.
   
  
 0.489
inpp5d
Inositol polyphosphate-5-phosphatase D.
   
  
 0.479
LOC115048151
ABI gene family member 3-like.
      
 0.471
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.