Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IFT122Intraflagellar transport 122. (1209 aa)    
Predicted Functional Partners:
galnt3
Tetratricopeptide repeat domain 21B.
   
 0.999
ENSENLP00000026534
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.999
wdr35
WD repeat domain 35.
  
0.999
IFT43
Intraflagellar transport 43.
    
 0.999
ENSENLP00000044550
annotation not available
   
 0.999
ift46
Intraflagellar transport 46.
    
 0.986
ENSENLP00000044131
Intraflagellar transport 172.
   
0.980
ift80
Intraflagellar transport 80.
   
 0.979
ENSENLP00000043222
Intraflagellar transport 81 homolog.
   
 0.979
ift57
Intraflagellar transport 57.
   
 0.978
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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