STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115043487Charged multivesicular body protein 4c-like. (222 aa)    
Predicted Functional Partners:
pdcd6ip
Programmed cell death 6 interacting protein.
    
 0.992
ENSENLP00000044202
Charged multivesicular body protein 3.
   
 0.986
chmp2a
Charged multivesicular body protein 2A.
    
 0.983
chmp7
Charged multivesicular body protein 7.
    
 0.976
ptpn23
Protein tyrosine phosphatase non-receptor type 23.
    
 0.975
snf8
SNF8 subunit of ESCRT-II.
    
 0.961
vps25
Vacuolar protein sorting 25 homolog.
    
 0.951
LOC115056408
Ubiquitin-conjugating enzyme E2 variant 3-like.
   
 0.949
LOC115048076
Charged multivesicular body protein 6-like.
    
0.945
chmp6
Charged multivesicular body protein 6.
    
0.945
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.