Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
pck1Phosphoenolpyruvate carboxykinase 1. (624 aa)    
Predicted Functional Partners:
pc
Pyruvate carboxylase.
  
 
 0.954
LOC115049622
Malate synthase, glyoxysomal-like.
     
 0.950
pdhb
Pyruvate dehydrogenase E1 beta subunit.
     
 0.925
cs
Citrate synthase.
  
 
 0.923
ENSENLP00000008565
Malate dehydrogenase 2, NAD (mitochondrial).
    
 0.923
ENSENLP00000009331
Malate dehydrogenase 1Ab, NAD (soluble).
  
 
 0.919
LOC115036885
Malate dehydrogenase, cytoplasmic-like.
  
 
 0.919
LOC115054009
Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like.
     
 0.910
LOC115060760
Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like.
     
 0.910
LOC115055028
Glutamate dehydrogenase, mitochondrial-like.
  
 
 0.907
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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