nkiras2 protein (Echeneis naucrates) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

nkiras2

NFKB inhibitor interacting Ras like 2. (192 aa)

Predicted Functional Partners:

dnajc11

0.832

ENSENLP00000030579

0.823

ENSENLP00000042306

0.823

ralgapb

0.792

ENSENLP00000052879

0.792

ENSENLP00000000553

0.740

gfod2

0.733

gfod1

0.733

LOC115049417

0.569

supt16h

0.556

Your Current Organism:

Echeneis naucrates

NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSENLP00000000553	nkiras2	ENSENLP00000000553	ENSENLP00000001530	DnaJ (Hsp40) homolog, subfamily C, member 11b.	NFKB inhibitor interacting Ras like 2.	0.740
ENSENLP00000030579	ENSENLP00000052879	ENSENLP00000030579	ENSENLP00000052879	Ral GTPase activating protein, alpha subunit 2 (catalytic).	annotation not available	0.976
ENSENLP00000030579	gfod1	ENSENLP00000030579	ENSENLP00000031388	Ral GTPase activating protein, alpha subunit 2 (catalytic).	Glucose-fructose oxidoreductase domain containing 1.	0.733
ENSENLP00000030579	gfod2	ENSENLP00000030579	ENSENLP00000006295	Ral GTPase activating protein, alpha subunit 2 (catalytic).	Glucose-fructose oxidoreductase domain containing 2.	0.733
ENSENLP00000030579	nkiras2	ENSENLP00000030579	ENSENLP00000001530	Ral GTPase activating protein, alpha subunit 2 (catalytic).	NFKB inhibitor interacting Ras like 2.	0.823
ENSENLP00000030579	ralgapb	ENSENLP00000030579	ENSENLP00000029201	Ral GTPase activating protein, alpha subunit 2 (catalytic).	Ral GTPase activating protein non-catalytic beta subunit.	0.976
ENSENLP00000042306	ENSENLP00000052879	ENSENLP00000042306	ENSENLP00000052879	Ral GTPase activating protein, alpha subunit 1 (catalytic).	annotation not available	0.976
ENSENLP00000042306	gfod1	ENSENLP00000042306	ENSENLP00000031388	Ral GTPase activating protein, alpha subunit 1 (catalytic).	Glucose-fructose oxidoreductase domain containing 1.	0.733
ENSENLP00000042306	gfod2	ENSENLP00000042306	ENSENLP00000006295	Ral GTPase activating protein, alpha subunit 1 (catalytic).	Glucose-fructose oxidoreductase domain containing 2.	0.733
ENSENLP00000042306	nkiras2	ENSENLP00000042306	ENSENLP00000001530	Ral GTPase activating protein, alpha subunit 1 (catalytic).	NFKB inhibitor interacting Ras like 2.	0.823
ENSENLP00000042306	ralgapb	ENSENLP00000042306	ENSENLP00000029201	Ral GTPase activating protein, alpha subunit 1 (catalytic).	Ral GTPase activating protein non-catalytic beta subunit.	0.976
ENSENLP00000052879	ENSENLP00000030579	ENSENLP00000052879	ENSENLP00000030579	annotation not available	Ral GTPase activating protein, alpha subunit 2 (catalytic).	0.976
ENSENLP00000052879	ENSENLP00000042306	ENSENLP00000052879	ENSENLP00000042306	annotation not available	Ral GTPase activating protein, alpha subunit 1 (catalytic).	0.976
ENSENLP00000052879	gfod1	ENSENLP00000052879	ENSENLP00000031388	annotation not available	Glucose-fructose oxidoreductase domain containing 1.	0.784
ENSENLP00000052879	gfod2	ENSENLP00000052879	ENSENLP00000006295	annotation not available	Glucose-fructose oxidoreductase domain containing 2.	0.784
ENSENLP00000052879	nkiras2	ENSENLP00000052879	ENSENLP00000001530	annotation not available	NFKB inhibitor interacting Ras like 2.	0.792
LOC115049417	gfod1	ENSENLP00000036543	ENSENLP00000031388	PDZ and LIM domain protein 2-like.	Glucose-fructose oxidoreductase domain containing 1.	0.430
LOC115049417	gfod2	ENSENLP00000036543	ENSENLP00000006295	PDZ and LIM domain protein 2-like.	Glucose-fructose oxidoreductase domain containing 2.	0.430
LOC115049417	nkiras2	ENSENLP00000036543	ENSENLP00000001530	PDZ and LIM domain protein 2-like.	NFKB inhibitor interacting Ras like 2.	0.569
dnajc11	nkiras2	ENSENLP00000032535	ENSENLP00000001530	DnaJ heat shock protein family (Hsp40) member C11.	NFKB inhibitor interacting Ras like 2.	0.832