STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115043801Protein TMEPAI-like. (290 aa)    
Predicted Functional Partners:
rps2
Ribosomal protein S2.
   
 0.877
fbl
Fibrillarin.
   
 
 0.874
smad3
SMAD family member 3.
    
 0.810
LOC115040841
Mothers against decapentaplegic homolog 3.
    
 0.810
smad2
SMAD family member 2.
    
 0.810
LOC115048648
Mothers against decapentaplegic homolog 2.
    
 0.810
nedd4
NEDD4 E3 ubiquitin protein ligase.
    
 
 0.755
LOC115051645
E3 ubiquitin-protein ligase NEDD4-like.
    
 
 0.755
ENSENLP00000009266
NHP2 ribonucleoprotein homolog (yeast).
   
 0.751
ENSENLP00000033575
GAR1 homolog, ribonucleoprotein.
   
 
 0.750
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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