STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115043801Protein TMEPAI-like. (290 aa)    
Predicted Functional Partners:
rps2
Ribosomal protein S2.
    
 0.889
ENSENLP00000050057
Protein arginine methyltransferase 5.
   
 0.833
fbl
Fibrillarin.
   
 
 0.822
tsr1
TSR1 ribosome maturation factor.
   
  0.800
bysl
Bystin like.
   
 0.799
trmt112
tRNA methyltransferase subunit 11-2.
   
 0.787
ENSENLP00000009266
NHP2 ribonucleoprotein homolog (yeast).
   
 0.783
smad3
SMAD family member 3.
    
 0.778
LOC115040841
Mothers against decapentaplegic homolog 3.
    
 0.778
smad2
SMAD family member 2.
    
 0.778
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.