Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000001538ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae). (651 aa)    
Predicted Functional Partners:
nol10
Nucleolar protein 10.
   
 
 0.994
mphosph10
M-phase phosphoprotein 10.
   
 
 0.990
utp3
UTP3 small subunit processome component.
   
 
 0.989
ENSENLP00000045505
Apoptosis antagonizing transcription factor.
   
 
 0.989
UTP18
UTP18 small subunit processome component.
   
 
 0.989
wdr36
WD repeat domain 36.
   
 
 0.987
nom1
Nucleolar protein with MIF4G domain 1.
   
 
 0.987
nol6
Nucleolar protein 6.
   
 
 0.986
LOC115042308
Probable ATP-dependent RNA helicase DDX10.
   
 
 0.985
ENSENLP00000003467
annotation not available
   
 
 0.985
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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