STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000001569MDM2 binding protein. (757 aa)    
Predicted Functional Partners:
mdm2
MDM2 proto-oncogene.
    
 0.981
ticrr
TOPBP1 interacting checkpoint and replication regulator.
   
 0.929
topbp1
DNA topoisomerase II binding protein 1.
   
 
 0.918
ENSENLP00000036993
MDM4 regulator of p53.
    
 0.895
ENSENLP00000005978
RecQ helicase-like 4.
   
 
 0.762
ENSENLP00000019700
DBF4 zinc finger.
   
 0.747
cdk8
Cyclin dependent kinase 8.
    
 
 0.740
CDK19
Cyclin dependent kinase 19.
    
 
 0.740
cdc45
Cell division cycle 45.
   
 
 0.737
tbp
TATA-box binding protein.
    
 0.713
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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