STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTP4A3Protein tyrosine phosphatase type IVA 3. (173 aa)    
Predicted Functional Partners:
ENSENLP00000000697
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
     
 0.819
rabggtb
Rab geranylgeranyltransferase subunit beta.
    
 0.775
ENSENLP00000000225
Cyclin and CBS domain divalent metal cation transport mediator 2b.
    
 
 0.664
LOC115048904
Metal transporter CNNM4-like.
    
 
 0.664
ENSENLP00000025243
Cyclin and CBS domain divalent metal cation transport mediator 4a.
    
 
 0.664
cnnm3
Cyclin and CBS domain divalent metal cation transport mediator 3.
    
 
 0.664
CNNM1
Metal transporter CNNM1-like.
    
 
 0.608
CNNM1-2
Cyclin and CBS domain divalent metal cation transport mediator 1.
    
 
 0.608
taf6
TATA-box binding protein associated factor 6.
     
 0.538
LOC115058914
TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.
     
 0.538
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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