Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
palldPalladin, cytoskeletal associated protein. (1446 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
   
 0.700
ENSENLP00000038659
Nebulin.
   
 0.684
tex10
Testis expressed 10.
   
 0.674
ENSENLP00000007091
annotation not available
   
 0.673
pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.671
myl7
Myosin light chain 7.
    
 0.670
ENSENLP00000023542
Calmodulin-like 4a.
    
 0.656
CALML6
Calmodulin like 6.
    
 0.655
ENSENLP00000034433
Calmodulin-like 4b.
    
  0.651
ENSENLP00000003856
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.620
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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