STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
palldPalladin, cytoskeletal associated protein. (1446 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
   
 0.758
tex10
Testis expressed 10.
   
 0.711
pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.695
LOC115061462
Myosin light chain 1, skeletal muscle isoform.
   
 0.654
calm2
Calmodulin.
    
 0.645
calm3
Calmodulin.
    
 0.645
ENSENLP00000037696
Calmodulin 1b.
    
 0.645
ENSENLP00000038659
Nebulin.
   
 0.645
calm3-2
Calmodulin.
    
 0.645
CALML6
Calmodulin like 6.
    
 0.643
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.