ENSENLP00000001596 protein (Echeneis naucrates)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSENLP00000001596

annotation not available (607 aa)

Predicted Functional Partners:

f2

0.729

LOC115043419

0.710

ENSENLP00000031228

0.710

ENSENLP00000003989

0.610

ENSENLP00000004118

0.610

ENSENLP00000004176

0.610

ENSENLP00000004233

0.610

proc

0.548

serpind1

0.539

ENSENLP00000001311

0.532

Your Current Organism:

Echeneis naucrates

NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSENLP00000001311	ENSENLP00000001596	ENSENLP00000001311	ENSENLP00000001596	annotation not available	annotation not available	0.532
ENSENLP00000001311	ENSENLP00000003989	ENSENLP00000001311	ENSENLP00000003989	annotation not available	annotation not available	0.724
ENSENLP00000001311	ENSENLP00000004118	ENSENLP00000001311	ENSENLP00000004118	annotation not available	annotation not available	0.724
ENSENLP00000001311	ENSENLP00000004176	ENSENLP00000001311	ENSENLP00000004176	annotation not available	annotation not available	0.724
ENSENLP00000001311	ENSENLP00000004233	ENSENLP00000001311	ENSENLP00000004233	annotation not available	annotation not available	0.724
ENSENLP00000001311	f2	ENSENLP00000001311	ENSENLP00000010648	annotation not available	Coagulation factor II, thrombin.	0.544
ENSENLP00000001311	proc	ENSENLP00000001311	ENSENLP00000021727	annotation not available	Protein C, inactivator of coagulation factors Va and VIIIa.	0.518
ENSENLP00000001596	ENSENLP00000001311	ENSENLP00000001596	ENSENLP00000001311	annotation not available	annotation not available	0.532
ENSENLP00000001596	ENSENLP00000003989	ENSENLP00000001596	ENSENLP00000003989	annotation not available	annotation not available	0.610
ENSENLP00000001596	ENSENLP00000004118	ENSENLP00000001596	ENSENLP00000004118	annotation not available	annotation not available	0.610
ENSENLP00000001596	ENSENLP00000004176	ENSENLP00000001596	ENSENLP00000004176	annotation not available	annotation not available	0.610
ENSENLP00000001596	ENSENLP00000004233	ENSENLP00000001596	ENSENLP00000004233	annotation not available	annotation not available	0.610
ENSENLP00000001596	ENSENLP00000031228	ENSENLP00000001596	ENSENLP00000031228	annotation not available	Rho guanine nucleotide exchange factor (GEF) 40.	0.710
ENSENLP00000001596	LOC115043419	ENSENLP00000001596	ENSENLP00000001644	annotation not available	Protein-glutamine gamma-glutamyltransferase 2-like.	0.710
ENSENLP00000001596	f2	ENSENLP00000001596	ENSENLP00000010648	annotation not available	Coagulation factor II, thrombin.	0.729
ENSENLP00000001596	proc	ENSENLP00000001596	ENSENLP00000021727	annotation not available	Protein C, inactivator of coagulation factors Va and VIIIa.	0.548
ENSENLP00000001596	serpind1	ENSENLP00000001596	ENSENLP00000050837	annotation not available	Serpin family D member 1.	0.539
ENSENLP00000003989	ENSENLP00000001311	ENSENLP00000003989	ENSENLP00000001311	annotation not available	annotation not available	0.724
ENSENLP00000003989	ENSENLP00000001596	ENSENLP00000003989	ENSENLP00000001596	annotation not available	annotation not available	0.610
ENSENLP00000004118	ENSENLP00000001311	ENSENLP00000004118	ENSENLP00000001311	annotation not available	annotation not available	0.724