STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpa2Replication protein A2. (277 aa)    
Predicted Functional Partners:
rpa3
Replication protein A3.
   
 0.995
LOC115052984
Replication protein A 70 kDa DNA-binding subunit-like.
   
 0.993
RPA1
Replication protein A 70 kDa DNA-binding subunit-like.
   
 0.993
ENSENLP00000024951
annotation not available
   
 0.986
ENSENLP00000011398
RAD52 homolog, DNA repair protein.
    
 0.967
prim2
DNA primase subunit 2.
   
 0.962
blm
BLM RecQ like helicase.
   
 0.961
tapbp
TAP binding protein.
   
 0.959
ENSENLP00000047936
ATR serine/threonine kinase.
   
 0.959
ENSENLP00000005495
DNA topoisomerase III alpha.
    
 0.956
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.