STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000001656Plakophilin 4. (1136 aa)    
Predicted Functional Partners:
cdh5
Cadherin 5.
    
 0.853
ENSENLP00000025737
Catenin (cadherin-associated protein), alpha 2.
   
 0.851
ctnna1
Catenin alpha 1.
   
 0.851
LOC115055247
B-cadherin-like.
    
 0.805
LOC115056970
B-cadherin-like.
    
 0.805
ENSENLP00000026567
Afadin, adherens junction formation factor a.
   
 
 0.786
ctnnb1
Catenin beta 1.
   
 0.774
LOC115049769
Junction plakoglobin-like.
   
 0.774
ENSENLP00000044726
annotation not available
   
 0.774
LOC115050787
Catenin beta-1-like.
   
 0.774
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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