Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLXND1Plexin D1. (1902 aa)    
Predicted Functional Partners:
nrp1
Neuropilin 1.
   
 0.943
met
MET proto-oncogene, receptor tyrosine kinase.
    
 
0.826
ENSENLP00000005051
Si:ch211-113g11.6.
    
 0.794
LOC115041061
semaphorin-7A-like.
    
 0.794
sema7a
Semaphorin 7A (John Milton Hagen blood group).
    
 0.794
sema3b
Semaphorin 3B.
    
 0.778
sema3a
Semaphorin 3A.
    
 0.778
LOC115036637
Semaphorin-3ab-like.
    
 0.778
ENSENLP00000003964
FES proto-oncogene, tyrosine kinase.
   
 0.739
fer
FER tyrosine kinase.
   
 0.739
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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