STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000001709Strawberry notch homolog 2. (1230 aa)    
Predicted Functional Partners:
CDK2AP1
Cyclin dependent kinase 2 associated protein 1.
     
 0.733
cdk2ap2
Cyclin dependent kinase 2 associated protein 2.
     
 0.733
ENSENLP00000026750
Vestigial-like family member 2a.
    
   0.611
ENSENLP00000029951
Nucleolar protein 8.
      
 0.558
hdac3
Histone deacetylase 3.
      
 0.552
ENSENLP00000006933
SRY-box transcription factor 5.
      
 0.535
tm9sf3
Transmembrane 9 superfamily member 3.
    
   0.505
LOC115058704
galactose-3-O-sulfotransferase 2-like.
      
 0.501
ENSENLP00000053923
Tetratricopeptide repeat domain 26.
      
 0.478
dyrk2
Dual specificity tyrosine phosphorylation regulated kinase 2.
    
 
 0.477
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.