Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
snrpcSmall nuclear ribonucleoprotein polypeptide C. (148 aa)    
Predicted Functional Partners:
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.998
snrpg
Small nuclear ribonucleoprotein polypeptide G.
   
 0.998
snrpf
Small nuclear ribonucleoprotein polypeptide F.
   
 0.998
snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 0.998
snrpd3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.998
snrpd1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.996
snrpb
Small nuclear ribonucleoprotein polypeptides B and B1.
   
 0.996
snrnp70
Small nuclear ribonucleoprotein U1 subunit 70.
   
 0.991
snrpb2
Small nuclear ribonucleoprotein polypeptide B2.
   
 0.987
snrpa
Small nuclear ribonucleoprotein polypeptide A.
   
 0.987
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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