STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMCC1Transmembrane and coiled-coil domain family 1. (479 aa)    
Predicted Functional Partners:
TMCC3
Transmembrane and coiled-coil domain protein 3-like.
   
 
 0.634
TMCC3-2
Transmembrane and coiled-coil domain family 3.
   
 
 0.634
haus7
HAUS augmin like complex subunit 7.
      
 0.538
LOC115044866
Apolipoprotein Eb-like.
    
   0.527
hspd1
Heat shock protein family D (Hsp60) member 1.
    
   0.495
LOC115035257
Amyloid-beta A4 protein-like.
    
 
 0.485
APP
Amyloid beta precursor protein.
    
 
 0.485
dstyk
Dual serine/threonine and tyrosine protein kinase.
      
 0.466
ENSENLP00000050960
annotation not available
      
 0.447
chpf
Chondroitin polymerizing factor.
    
   0.405
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.