STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115044249Uncharacterized protein C6orf106 homolog. (283 aa)    
Predicted Functional Partners:
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.792
rps27a
Ribosomal protein S27a.
    
  0.792
ENSENLP00000023081
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.792
ENSENLP00000035060
annotation not available
    
  0.792
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.718
gsap
Gamma-secretase activating protein.
    
 0.712
ENSENLP00000011562
Sequestosome 1.
    
 0.712
LOC115047269
Next to BRCA1 gene 1 protein-like.
    
 0.712
LOC115060315
Next to BRCA1 gene 1 protein-like.
    
 0.712
tomm70
Translocase of outer mitochondrial membrane 70.
     
  0.695
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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