STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdcd11Programmed cell death 11. (1815 aa)    
Predicted Functional Partners:
mrps9
Mitochondrial ribosomal protein S9.
  
 0.999
mrps12
Mitochondrial ribosomal protein S12.
  
 0.999
eed
Embryonic ectoderm development.
   
 0.999
nop58
NOP58 ribonucleoprotein.
   
 0.999
wdr46
WD repeat domain 46.
   
 0.999
nol6
Nucleolar protein 6.
   
 0.999
arl6ip1
ADP ribosylation factor like GTPase 6 interacting protein 1.
  
 0.999
rps15a
Ribosomal protein S15a.
  
 0.999
fbl
Fibrillarin.
   
 0.999
rplp0
Ribosomal protein lateral stalk subunit P0.
   
 0.999
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.