ENSENLP00000001828 protein (Echeneis naucrates)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSENLP00000001828

Si:dkey-276j7.1. (218 aa)

Predicted Functional Partners:

traf6

0.853

VANGL1

0.739

vangl2

0.739

ENSENLP00000048080

0.739

fhl1

0.736

LOC115053930

0.736

dnal4

0.723

ENSENLP00000015023

0.718

ENSENLP00000015028

0.718

LOC115057764

0.718

Your Current Organism:

Echeneis naucrates

NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSENLP00000001828	ENSENLP00000015023	ENSENLP00000001828	ENSENLP00000015023	Si:dkey-276j7.1.	annotation not available	0.718
ENSENLP00000001828	ENSENLP00000015028	ENSENLP00000001828	ENSENLP00000015028	Si:dkey-276j7.1.	annotation not available	0.718
ENSENLP00000001828	ENSENLP00000048080	ENSENLP00000001828	ENSENLP00000048080	Si:dkey-276j7.1.	VANGL planar cell polarity protein 2.	0.739
ENSENLP00000001828	LOC115053930	ENSENLP00000001828	ENSENLP00000017555	Si:dkey-276j7.1.	Four and a half LIM domains protein 1-like.	0.736
ENSENLP00000001828	LOC115057764	ENSENLP00000001828	ENSENLP00000027142	Si:dkey-276j7.1.	Segment polarity protein dishevelled homolog DVL-3-like.	0.718
ENSENLP00000001828	VANGL1	ENSENLP00000001828	ENSENLP00000004452	Si:dkey-276j7.1.	VANGL planar cell polarity protein 1.	0.739
ENSENLP00000001828	dnal4	ENSENLP00000001828	ENSENLP00000000263	Si:dkey-276j7.1.	Dynein axonemal light chain 4.	0.723
ENSENLP00000001828	fhl1	ENSENLP00000001828	ENSENLP00000010407	Si:dkey-276j7.1.	Four and a half LIM domains 1.	0.736
ENSENLP00000001828	traf6	ENSENLP00000001828	ENSENLP00000007254	Si:dkey-276j7.1.	TNF receptor associated factor 6.	0.853
ENSENLP00000001828	vangl2	ENSENLP00000001828	ENSENLP00000021995	Si:dkey-276j7.1.	VANGL planar cell polarity protein 2.	0.739
ENSENLP00000015023	ENSENLP00000001828	ENSENLP00000015023	ENSENLP00000001828	annotation not available	Si:dkey-276j7.1.	0.718
ENSENLP00000015023	ENSENLP00000048080	ENSENLP00000015023	ENSENLP00000048080	annotation not available	VANGL planar cell polarity protein 2.	0.962
ENSENLP00000015023	LOC115053930	ENSENLP00000015023	ENSENLP00000017555	annotation not available	Four and a half LIM domains protein 1-like.	0.560
ENSENLP00000015023	VANGL1	ENSENLP00000015023	ENSENLP00000004452	annotation not available	VANGL planar cell polarity protein 1.	0.964
ENSENLP00000015023	fhl1	ENSENLP00000015023	ENSENLP00000010407	annotation not available	Four and a half LIM domains 1.	0.560
ENSENLP00000015023	vangl2	ENSENLP00000015023	ENSENLP00000021995	annotation not available	VANGL planar cell polarity protein 2.	0.962
ENSENLP00000015028	ENSENLP00000001828	ENSENLP00000015028	ENSENLP00000001828	annotation not available	Si:dkey-276j7.1.	0.718
ENSENLP00000015028	ENSENLP00000048080	ENSENLP00000015028	ENSENLP00000048080	annotation not available	VANGL planar cell polarity protein 2.	0.962
ENSENLP00000015028	LOC115053930	ENSENLP00000015028	ENSENLP00000017555	annotation not available	Four and a half LIM domains protein 1-like.	0.560
ENSENLP00000015028	VANGL1	ENSENLP00000015028	ENSENLP00000004452	annotation not available	VANGL planar cell polarity protein 1.	0.962