STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115041011Interferon regulatory factor 1-like. (263 aa)    
Predicted Functional Partners:
mdm2
MDM2 proto-oncogene.
    
  0.936
ENSENLP00000036993
MDM4 regulator of p53.
    
  0.800
myd88
MYD88 innate immune signal transduction adaptor.
   
 0.792
hdac3
Histone deacetylase 3.
    
 0.763
ENSENLP00000017745
annotation not available
    
 0.763
LOC115050840
Probable histone deacetylase 1-B.
    
 0.763
hdac8
Histone deacetylase 8.
    
 0.763
HDAC2
Histone deacetylase 2.
    
 0.763
suox
Sulfite oxidase.
     
 0.735
LOC115050671
chromodomain-helicase-DNA-binding protein 4-like.
    
  0.718
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.