STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nudt19Nudix hydrolase 19. (392 aa)    
Predicted Functional Partners:
ENSENLP00000014474
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
 0.900
edc4
Enhancer of mRNA decapping 4.
    
 0.868
dcp1a
Decapping mRNA 1A.
    
 0.858
dcp1b
Decapping mRNA 1B.
    
 0.858
ENSENLP00000027421
5'-3' exoribonuclease 1.
   
 0.857
patl1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.820
ENSENLP00000048915
PAT1 homolog 2.
    
 0.820
lsm1
LSM1 homolog, mRNA degradation associated.
    
 0.813
ENSENLP00000048193
annotation not available
  
 0.794
ENSENLP00000049371
Transient receptor potential cation channel, subfamily M, member 2.
    
 0.786
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.