STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115043132Flocculation protein FLO11-like. (620 aa)    
Predicted Functional Partners:
smad3
SMAD family member 3.
    
 0.930
LOC115040841
Mothers against decapentaplegic homolog 3.
    
 0.930
smad2
SMAD family member 2.
    
 0.930
LOC115048648
Mothers against decapentaplegic homolog 2.
    
 0.930
tgif1
TGFB induced factor homeobox 1.
     
  0.873
LOC115056433
SIN3-HDAC complex-associated factor-like.
   
 
 0.751
LOC115050019
Mothers against decapentaplegic homolog 5.
    
 0.706
ints8
Integrator complex subunit 8.
    
 0.706
ENSENLP00000013012
SMAD family member 1.
    
 0.706
smad9
SMAD family member 9.
    
 0.706
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.