Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115041484AN1-type zinc finger protein 3-like. (250 aa)    
Predicted Functional Partners:
ENSENLP00000011564
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.694
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.694
wdr43
WD repeat domain 43.
      
 0.636
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.607
ENSENLP00000023081
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.607
LOC115053287
Protein phosphatase 1A-like.
      
 0.586
rab5c
RAB5C, member RAS oncogene family.
   
 0.581
LOC115059632
Ras-related protein Rab-5C-like.
   
 0.581
ENSENLP00000011176
RAB22A, member RAS oncogene family.
   
 0.581
LOC115050522
Zinc fingers and homeoboxes protein 2-like.
   
 0.581
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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