STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115041484AN1-type zinc finger protein 3-like. (250 aa)    
Predicted Functional Partners:
ENSENLP00000011564
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.854
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.854
rps27a
Ribosomal protein S27a.
    
  0.681
ENSENLP00000035060
annotation not available
    
  0.681
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.667
ENSENLP00000023081
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.667
rab21
RAB21, member RAS oncogene family.
   
 
 0.628
zfand4
Zinc finger AN1-type containing 4.
    
 0.619
als2
Alsin Rho guanine nucleotide exchange factor ALS2.
    
 0.618
ENSENLP00000020902
annotation not available
    
 0.618
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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