Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSENLP00000001965MAM domain containing glycosylphosphatidylinositol anchor 1. (939 aa)    
Predicted Functional Partners:
rnpc3
RNA binding region (RNP1, RRM) containing 3.
      
 0.700
wdr43
WD repeat domain 43.
      
 0.610
LOC115037686
AN1-type zinc finger protein 3-like.
      
 0.601
ENSENLP00000042864
Leucine rich repeat and fibronectin type III domain containing 5a.
   
 0.586
ENSENLP00000014648
Transthyretin (prealbumin, amyloidosis type I).
     
 0.582
EXT1
Exostosin-1a-like.
      
 0.571
LOC115050656
Exostosin-1b.
      
 0.571
ENSENLP00000022284
annotation not available
      
 0.571
arl16
ADP ribosylation factor like GTPase 16.
      
 0.568
actr10
Actin related protein 10.
    
 
 0.568
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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