STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000001977BAF chromatin remodeling complex subunit BCL11A b. (800 aa)    
Predicted Functional Partners:
actl6a
Actin like 6A.
   
 0.809
bcl7a
BAF chromatin remodeling complex subunit BCL7A.
   
 0.760
smarcd2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.
    
  0.756
bcl7b
BAF chromatin remodeling complex subunit BCL7B.
    
 0.753
arid2
AT-rich interaction domain 2.
     
 0.750
brd9
Bromodomain containing 9.
     
 0.739
ENSENLP00000046858
annotation not available
    
  0.623
ENSENLP00000046868
annotation not available
    
  0.623
ENSENLP00000048193
annotation not available
    
 0.616
RBBP4
Histone-binding protein RBBP4-like.
   
 0.614
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.