STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capn7Calpain 7. (822 aa)    
Predicted Functional Partners:
ENSENLP00000004985
Calpain, small subunit 1 b.
   
 0.884
CAPNS1
Calpain small subunit 1-like.
   
 0.884
cast
Calpastatin.
    
 0.836
ENSENLP00000025072
Intersectin 2b.
   
 
  0.637
ENSENLP00000025311
Intersectin 2a.
   
 
  0.637
pef1
penta-EF-hand domain containing 1.
   
 0.611
LOC115045106
Sorcin-like.
   
 0.611
pdcd6
Programmed cell death 6.
   
 0.611
LOC115051804
Grancalcin-like.
   
 0.611
LOC115053350
Caspase-1-like.
   
 0.546
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.