STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000002017DNA-damage inducible protein 2. (445 aa)    
Predicted Functional Partners:
ENSENLP00000004347
Ubiquitin B.
   
 
 0.925
rps27a
Ribosomal protein S27a.
   
 
 0.876
rad23a
RAD23 homolog A, nucleotide excision repair protein.
   
 
 0.832
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 
 0.832
ENSENLP00000002007
annotation not available
 
 
 
 0.831
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 
 0.802
ENSENLP00000011643
Proteasome 26S subunit, non-ATPase 2.
    
 
 0.763
ENSENLP00000035060
annotation not available
   
 
 0.723
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
   0.674
UBQLN4
Ubiquilin 4.
   
 
 0.674
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.