STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115044515Plectin-like. (5581 aa)    
Predicted Functional Partners:
ENSENLP00000029144
Integrin, beta 4.
  
 0.907
LOC115049769
Junction plakoglobin-like.
   
 0.809
ENSENLP00000044726
annotation not available
   
 0.809
ENSENLP00000043826
Spectrin alpha, non-erythrocytic 1.
   
0.791
LOC115057640
Desmocollin-2-like.
   
 0.783
ctnnb1
Catenin beta 1.
    
 0.703
LOC115050787
Catenin beta-1-like.
    
 0.703
tada3
Transcriptional adaptor 3.
    
 0.702
ENSENLP00000046062
Transformation/transcription domain-associated protein.
   
 0.697
ENSENLP00000000697
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.690
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.