STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000002321Nuclear envelope integral membrane protein 1. (436 aa)    
Predicted Functional Partners:
LOC115061434
E3 SUMO-protein ligase RanBP2-like.
   
 
 0.863
ENSENLP00000000933
RAN GTPase activating protein 1a.
   
 
 0.698
LOC115059944
Ran GTPase-activating protein 1-like.
   
 
 0.698
ranbp1
RAN binding protein 1.
   
 
 0.618
LOC115047157
SUMO-conjugating enzyme UBC9-like.
    
   0.592
ube2i
Ubiquitin conjugating enzyme E2 I.
    
   0.592
ccdc77
Coiled-coil domain containing 77.
   
  
 0.573
adgrd1
Adhesion G protein-coupled receptor D1.
   
 
 0.572
ran
RAN, member RAS oncogene family.
   
 
 0.572
GCC2
GRIP and coiled-coil domain containing 2.
   
 
 0.569
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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