STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115047942Serine/arginine repetitive matrix protein 2-like. (1409 aa)    
Predicted Functional Partners:
prpf19
pre-mRNA processing factor 19.
    
 0.999
bud31
BUD31 homolog.
    
 0.999
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 0.999
cdc5l
Cell division cycle 5 like.
   
 0.999
snrnp200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 0.999
cdc40
Cell division cycle 40.
   
 0.999
ENSENLP00000022948
pre-mRNA processing factor 8.
   
 0.998
snrpa1
Small nuclear ribonucleoprotein polypeptide A.
    
 0.997
syf2
SYF2 pre-mRNA splicing factor.
    
 0.997
rbmx2
RNA binding motif protein X-linked 2.
   
 0.997
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.