Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000003151annotation not available (163 aa)    
Predicted Functional Partners:
lig4
DNA ligase 4.
    
 0.988
xrcc6
X-ray repair cross complementing 6.
    
 0.964
xrcc5
X-ray repair cross complementing 5.
    
 0.949
aptx
Aprataxin.
    
 
 0.948
LOC115052467
DNA repair protein XRCC4-like.
  
  
 
0.945
ENSENLP00000000472
annotation not available
    
 
 0.942
pnkp
Polynucleotide kinase 3'-phosphatase.
    
 
 0.915
nhej1
Non-homologous end joining factor 1.
    
 0.915
paxx
PAXX non-homologous end joining factor.
    
 0.904
lig1
DNA ligase 1.
    
 0.858
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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