STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem167aTransmembrane protein 167A. (93 aa)    
Predicted Functional Partners:
LOC115042187
Ribonuclease P protein subunit p21-like.
   
 
  0.831
nop10
NOP10 ribonucleoprotein.
   
 
  0.820
rpp30
Ribonuclease P/MRP subunit p30.
   
 
 0.814
c16h15orf40
Chromosome 16 C15orf40 homolog.
   
 
  0.813
taf11
TATA-box binding protein associated factor 11.
   
 
  0.795
lsm6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 
  0.761
ier3ip1
Immediate early response 3 interacting protein 1.
   
   0.677
ENSENLP00000046891
annotation not available
   
   0.677
ENSENLP00000000581
Ribonuclease P/MRP 25 subunit-like.
   
 
 0.646
ENSENLP00000011597
annotation not available
   
 
 0.646
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.