STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arl13bADP ribosylation factor like GTPase 13B. (380 aa)    
Predicted Functional Partners:
ENSENLP00000008426
Component of oligomeric golgi complex 8.
   
 0.866
ift88
Intraflagellar transport 88.
    
 0.855
pde6d
Phosphodiesterase 6D.
     
 0.854
cog6
Component of oligomeric golgi complex 6.
    
 0.840
ift22
Intraflagellar transport 22.
    
 
 0.836
inpp5e
Inositol polyphosphate-5-phosphatase E.
     
 0.825
AKAP9
A-kinase anchoring protein 9.
    
 0.819
ENSENLP00000043222
Intraflagellar transport 81 homolog.
    
 
 0.807
ift46
Intraflagellar transport 46.
    
 
 0.804
ENSENLP00000032741
Intraflagellar transport 74.
    
 0.797
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.