STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddx49DEAD-box helicase 49. (473 aa)    
Predicted Functional Partners:
utp3
UTP3 small subunit processome component.
   
 0.999
bysl
Bystin like.
   
 0.998
abt1
Activator of basal transcription 1.
   
 0.998
wdr46
WD repeat domain 46.
   
 0.997
ddx52
DExD-box helicase 52.
  
0.996
nol6
Nucleolar protein 6.
   
 0.995
utp25
UTP25 small subunit processor component.
   
 
 0.995
pdcd11
Programmed cell death 11.
  
 0.994
eed
Embryonic ectoderm development.
   
 0.993
emg1
EMG1 N1-specific pseudouridine methyltransferase.
   
 0.993
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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