STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115043526Synaptophysin-like protein 1. (234 aa)    
Predicted Functional Partners:
ENSENLP00000006197
Vesicle-associated membrane protein 1.
   
 0.651
ENSENLP00000011403
Zgc:92912.
   
 0.651
vamp2
Vesicle associated membrane protein 2.
   
 0.651
ENSENLP00000009194
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
     
 0.571
VAMP3
Vesicle associated membrane protein 3.
   
 0.566
ENSENLP00000036312
annotation not available
   
 0.541
snap25
Synaptosome associated protein 25.
   
 0.541
nagk
N-acetylglucosamine kinase.
     
 0.533
ENSENLP00000023187
Meiosis 1 associated protein.
     
 0.533
LOC115041491
Sialic acid synthase-like.
     
 0.525
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.