STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000004880Tropomodulin 4 (muscle). (365 aa)    
Predicted Functional Partners:
gps1
G protein pathway suppressor 1.
    
  0.882
cops3
COP9 signalosome subunit 3.
    
  0.881
ENSENLP00000044395
Heat shock protein 5.
    
  0.869
cops5
COP9 signalosome subunit 5.
    
 0.857
ENSENLP00000008554
Angiomotin.
    
  0.856
cops7a
COP9 signalosome subunit 7A.
    
  0.856
ENSENLP00000038659
Nebulin.
   
 0.851
basp1
Brain abundant membrane attached signal protein 1.
    
  0.847
COPS6
COP9 signalosome subunit 6.
    
  0.832
LOC115043904
DDB1- and CUL4-associated factor 1-like.
    
  0.817
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.