STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000005000Bromodomain adjacent to zinc finger domain, 1B. (1666 aa)    
Predicted Functional Partners:
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.999
sf3b1
Splicing factor 3b subunit 1.
   
 0.981
mybbp1a
MYB binding protein 1a.
   
 0.981
ddx21
DExD-box helicase 21.
   
 0.974
myo1c
Myosin IC.
    
  0.960
LOC115053931
Unconventional myosin-Ic-like.
    
  0.960
pole3
DNA polymerase epsilon 3, accessory subunit.
    
 0.938
ENSENLP00000010101
Chromatin accessibility complex subunit 1.
    
 0.918
chd1l
Chromodomain helicase DNA binding protein 1 like.
   
 0.851
tubgcp5
Tubulin gamma complex associated protein 5.
      
 0.824
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.