STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000005000Bromodomain adjacent to zinc finger domain, 1B. (1666 aa)    
Predicted Functional Partners:
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.994
pole3
DNA polymerase epsilon 3, accessory subunit.
    
 0.988
ercc6
ERCC excision repair 6, chromatin remodeling factor.
    
 0.969
ENSENLP00000010101
Chromatin accessibility complex subunit 1.
   
 0.965
mybbp1a
MYB binding protein 1a.
    
 0.958
sf3b1
Splicing factor 3b subunit 1.
   
 0.950
LOC115056530
Cat eye syndrome critical region protein 2 homolog.
   
0.943
ddx21
DExD-box helicase 21.
   
 
 0.943
c14h17orf49
Chromosome 14 C17orf49 homolog.
     
 0.931
ENSENLP00000020695
annotation not available
   
 
  0.923
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.